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Table 2 Overlapping KEGG pathways between the two groups

From: Quantitative proteomic analysis of Bi Zhong Xiao decoction against collagen-induced arthritis rats in the early and late stages

KEGG Pathways

Common Genes

CIA/Control

BZXD/CIA

PValue

Count

PValue

Count

28 Day

  Focal adhesion

MYLPF, ACTN3, CAV1, COL5A2, COL6A1, CHAD, TLN2

0.0011

11

0.0000

39

  Carbon metabolism

HK3, PC, ME1, PGP, ENO2

0.0021

8

0.0000

33

  Biosynthesis of antibiotics

ENO2

0.0051

10

0.0000

40

  ECM-receptor interaction

COL5A2, COL6A1, CHAD

0.0102

6

0.0000

24

  Glycolysis / Gluconeogenesis

HK3, ALDH2, ENO2

0.0199

5

0.0000

14

  Pyruvate metabolism

PC, ALDH2, ME1

0.0211

4

0.0000

12

  Complement and coagulation cascades

CFD, KLKB1, KNG2, KNG1, C2

0.0007

7

0.0000

18

  Metabolic pathways

HIBADH, GDA, HEXB, PYGM, NT5C2, ENO2, PAPSS1, HK3, ALDH2, ME1, GGT5, CKM, ACLY, PC, FASN, PGP, PLPP3

0.0113

30

0.0000

96

42 Day

  Focal adhesion

MYLPF, COL3A1, ACTN3, COL6A5

0.0012

12

0.0139

6

  Carbon metabolism

RPIA, PHGDH, GPT

0.0003

10

0.0092

5

  Biosynthesis of antibiotics

RPIA, PHGDH

0.0053

11

0.0620

5

  Fatty acid metabolism

FASN, ACADSB

0.0149

5

0.0524

3

  Metabolic pathways

AHCYL1, GPT, AKR1B8, PAPSS1, ALAD, UROD, PHGDH, FDPS, ACADSB, RPIA, FASN

0.0046

36

0.0098

17