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Table 3 Virtual docking of ten bioactive compounds of GEB and CRC targets

From: A network pharmacology-based investigation on the bioactive ingredients and molecular mechanisms of Gelsemium elegans Benth against colorectal cancer

NO

Name

The number of Hydrogen bond

Amino acid residue

Structure

Target

Binding Energy

(kcal·mol−1)

21

Gelegamine E

1

LYS`745

EGFR

−8.0

4

ARG`870

PIK3CD

−5.3

1

ASP`86

CDK2

−7.7

2

ARG`59

CCND1

−6.8

31

Gelsesyringalidine

4

ARG`870/GLU`873/SER`878

PIK3CD

−2.9

2

ASP`86/LYS`89

CDK2

−10.1

5

LYS`131/MET`125/TYR`53

MAPK3

−9.5

43

Humantenine

NA

NA

EGFR

−8.3

1

LYS`89

CDK2

−5.7

19

19α-Hydroxygelsamydine

1

ER`720

EGFR

−9.5

2

TYR`53/GLU`50

MAPK3

−9.7

5

Gelsedine

3

ARG`59/LYS`114

CCND1

−6.7

6

19 - Z- akuammidine

1

ARG`52

CCND1

− 6.6

23

Gelegamine B

4

ARG`870

PIK3CD

−6.3

46

Tabersonine

1

LYS`131

MAPK3

−9.2

36

Koumine

NA

NA

AR

−9.0

1

SER`170

MAPK3

−7.9

37

Gelsemine

1

CYS`797

EGFR

−8.2

  1. NA Not applicable