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Table 4 The fold-change determined by RNA-seq and qRT-PCR of selected genes

From: Antimicrobial characteristics of Berberine against prosthetic joint infection-related Staphylococcus aureus of different multi-locus sequence types

Gene Name Gene Annotation Log2 Fold-change
RNA-seq qRT-PCR
icaA poly-beta-1,6-N-acetyl-D-glucosamine synthase 2.22 2.12
icaR Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR −2.31 −2.45
fnbA Fibronectin-binding protein A 1.53 1.66
lrgA murein hydrolase regulator LrgA −2.59 − 2.42
lrgB hydrolase activity −2.71 −2.51
cidA Holin-like protein CidA 2.06 2.15
srrB sensor histidine kinase 1.08 1.17
spa immunoglobulin G-binding protein A 2.60 2.72
nuc thermonuclease 2.02 2.10