Table 2 Differentially expressed lncRNAs and mRNAs in TB cases with PYD syndrome
Seqname | GeneSymbol | P-value | Absolute Fold Change | Associated Gene | ||||
|---|---|---|---|---|---|---|---|---|
A vs. control | A vs. B | A vs. C | A vs. control | A vs. B | A vs. C | |||
lncRNA | ||||||||
 ENST00000536029 | RP11-392P7.8 | 3.41E-07 | 8.50E-04 | 1.35E-04 | 47.87 | 44.37 | 44.85 | GPRC5D |
 ENST00000543515 | RP11-392P7.8 | 4.86E-05 | 1.72E-05 | 1.43E-04 | 39.01 | 44.01 | 31.53 | GPRC5D |
 NR_036524 | MICA | 1.70E-05 | 1.20E-04 | 4.19E-05 | 44.00 | 36.07 | 29.72 | MICA |
 ENST00000467458 | RP11-796I2.2 | 1.48E-05 | 4.18E-07 | 1.91E-05 | 31.88 | 49.41 | 43.14 | PRKAG2 |
 uc002mej.1 | AK056073 | 2.89E-06 | 1.40E-07 | 1.16E-07 | 5.28 | 5.46 | 5.52 | ACSBG2 |
 TCONS_00002486 | XLOC_001036 | 5.51E-06 | 1.81E-06 | 7.44E-04 | −5.57 | −5.62 | −4.58 | KCNN3 |
 DA401339 | / | 1.76E-04 | 8.76E-04 | 4.92E-04 | −3.65 | −4.94 | −5.47 | POU3F2 |
 NR_036569 | PILRB | 1.73E-05 | 3.32E-05 | 1.42E-04 | −4.32 | −3.77 | −4.53 | PILRB |
 ENST00000458682 | LINC00202 | 1.72E-03 | 1.94E-03 | 3.23E-03 | −5.12 | −5.48 | −4.45 | / |
 ENST00000517670 | RP11-363E6.3 | 5.20E-05 | 9.24E-03 | 6.41E-04 | −2.66 | −2.75 | −2.74 | FABP5 |
mRNA | ||||||||
 NM_033641 | COL4A6 | 6.59E-04 | 1.23E-02 | 3.81E-05 | 3.04 | 3.63 | 2.76 | / |
 NM_001079807 | PGA3 | 1.32E-05 | 1.62E-03 | 9.73E-06 | 2.71 | 2.41 | 2.86 | / |
 NM_001079808 | PGA4 | 7.14E-06 | 2.51E-03 | 9.10E-05 | 5.07 | 5.30 | 4.12 | / |
 NM_014224 | PGA5 | 2.76E-06 | 2.84E-04 | 1.83E-02 | 2.88 | 4.08 | 2.81 | / |
 ENST00000412532 | SLC1A5 | 5.62E-03 | 2.18E-03 | 8.24E-04 | 4.78 | 11.40 | 8.89 | / |
 NM_012244 | SLC7A8 | 6.75E-05 | 2.77E-03 | 1.52E-03 | 4.45 | 4.81 | 3.47 | / |
 NM_004174 | SLC9A3 | 5.38E-06 | 5.64E-06 | 5.33E-06 | 4.85 | 4.81 | 4.86 | / |
 NM_199235 | COLEC11 | 3.00E-05 | 6.87E-04 | 5.33E-03 | −6.77 | −2.80 | −4.07 | / |
 NM_020664 | DECR2 | 1.37E-05 | 7.59E-05 | 7.84E-04 | −3.54 | −3.61 | −3.76 | / |
 NM_018248 | NEIL3 | 2.06E-04 | 8.97E-05 | 9.04E-05 | −2.97 | −2.97 | −3.28 | / |