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Table 1 Gene name, accession number, reverse and forward primer sequences used in GeXP multiplex gene expression analysis

From: Ethyl acetate extract of germinated brown rice attenuates hydrogen peroxide-induced oxidative stress in human SH-SY5Y neuroblastoma cells: role of anti-apoptotic, pro-survival and antioxidant genes

Gene name

Accession number

Primer sequences* with universal tags (underlined)

  

Forward

Reverse

GAPDHa

NM_002046

AGGTGACACTATAGAATA AAGGTGAAGGTCGGAGTCAA

GTACGACTCACTATAGGGA GATCTCGCTCCTGGAAGATG

KanRb

-

AGGTGACACTATAGAATA ATCATCAGCATTGCATTCGATTCCTGTTTG

GTACGACTCACTATAGGGA ATTCCGACTCGTCCAACATC

Hyaluronidasea

AJ000099

AGGTGACACTATAGAATA CAGCAGTTCATGCTGGAGAC

GTACGACTCACTATAGGGA CCAGGTAGACAGACGGGAAG

18 sRNAa,#

M10098

AGGTGACACTATAGAATA GGAGTGGAGCCTGCGGCTTAA

GTACGACTCACTATAGGGA TAGCATGCCAGAGTCTCGTT

ACTBa

NM_001101

AGGTGACACTATAGAATA GATCATTGCTCCTCCTGAGC

GTACGACTCACTATAGGGA AAAGCCATGCCAATCTCATC

AKT

NM_001014431

AGGTGACACTATAGAATA GAGGAGATGGACTTCCGGTC

GTACGACTCACTATAGGGA AGGATCTTCATGGCGTAGTAGC

p53

NM_001126117

AGGTGACACTATAGAATA GGGGAGCAGGGCTCA

GTACGACTCACTATAGGGA AAAATGGCAGGGGAGGG

JNK

NM_139046

AGGTGACACTATAGAATA CAGAAGCTCCACCACCAAAGAT

GTACGACTCACTATAGGGA GCCATTGATCACTGCTGCAC

ERK1/2

NM_002745

AGGTGACACTATAGAATA GGAGCAGTATTACGACCCGA

GTACGACTCACTATAGGGA GATGTCTGAGCACGTCCAGT

p38 MAPK

NM_001315

AGGTGACACTATAGAATA TTCAGTCTTTGACTCAGATGCC

GTACGACTCACTATAGGGA GTCAGGCTTTTCCACTCATCT

SOD 1

NM_000454

AGGTGACACTATAGAATA TCATCAATTTCGAGCAGAAGG

GTACGACTCACTATAGGGA TGCTTTTTCATGGACCACC

SOD 2

NM_000636

AGGTGACACTATAGAATA CATCAAACGTGACTTTGGTTC

GTACGACTCACTATAGGGA CTCAGCATAACGATCGTGGTT

Catalase

NM_001752

AGGTGACACTATAGAATA GAAGTGCGGAGATTCAACACT

GTACGACTCACTATAGGGA ACACGGATGAACGCTAAGCT

  1. *Based on the Homo sapien gene sequences adopted from the National Center for Biotechnology Information GenBank Database [22]. a Housekeeping genes; b Internal control; # Normalization gene.